BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB017D12SP1|AL427165
(993 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1776 1952 0.0
>3x_Contig1776
Length = 26138
Score = 1952 bits (984), Expect = 0.0
Identities = 992/994 (99%), Gaps = 1/994 (0%)
Strand = Plus / Minus
Query: 1 gatcccaattttttctcttcattgcctcgaagaattgcttctctgatggataaacccaat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 24896 gatcccaattttttctcttcattgcctcgaagaattgcttctctgatggataaacccaat 24837
Query: 61 tatccgatgttccggttctaggaatggaggatttctctctctctgttggcaaattaacag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 24836 tatccgatgttccggttctaggaatggaggatttctctctctctgttggcaaattaacag 24777
Query: 121 ctgtggtatatttcgggtgttcaggtatctcatcacttgaacattcgacatcctcagtga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 24776 ctgtggtatatttcgggtgttcaggtatctcatcacttgaacattcgacatcctcagtga 24717
Query: 181 tgatcgatatgattggtgctggtgctgctgcaactgcagcaccgccagcagagccattaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 24716 tgatcgatatgattggtgctggtgctgctgcaactgcagcaccgccagcagagccattaa 24657
Query: 241 cggtctgtagatggtttttcagccatacatcctgggaagaatggtctaccggacaaactc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 24656 cggtctgtagatggtttttcagccatacatcctgggaagaatggtctaccggacaaactc 24597
Query: 301 ctgacccttcagaactagccggtggatgatttggaggtagtgcttttgctgattcattct 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 24596 ctgacccttcagaactagccggtggatgatttggaggtagtgcttttgctgattcattct 24537
Query: 361 tattattagtgctctgttgtttcaaccacacttccttcgtggagtcatccacaggacact 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 24536 tattattagtgctctgttgtttcaaccacacttccttcgtggagtcatccacaggacact 24477
Query: 421 taggctgttctggcattcttttgcactccacagttagcttctaaacagtcgcgaatcccc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 24476 taggctgttctggcattcttttgcactccacagttagcttctaaacagtcgcgaatcccc 24417
Query: 481 tttaagccgccaacgatgttgcttctatatttcgaactattgcgttcaagcctatcctga 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 24416 tttaagccgccaacgatgttgcttctatatttcgaactattgcgttcaagcctatcctga 24357
Query: 541 tgaaatgcgcatgaataagctttcctgtattcgcatgttctgcatacttttccatttcat 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 24356 tgaaatgcgcatgaataagctttcctgtattcgcatgttctgcatacttttccatttcat 24297
Query: 601 tcatttcttttcaattgatatcaaattgatgaagtttcagaatgaaattgatatccacgg 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 24296 tcatttcttttcaattgatatcaaattgatgaagtttcagaatgaaattgatatccacgg 24237
Query: 661 gagatgacatttcattacccgaatgtgcgacaaacatccttgtttctcacgtgacttgac 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 24236 gagatgacatttcattacccgaatgtgcgacaaacatccttgtttctcacgtgacttgac 24177
Query: 721 ctccagatggagacagctctccgttgtacatagcaatcgatcttgcagccaccgttaaca 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 24176 ctccagatggagacagctctccgttgtacatagcaatcgatcttgcagccaccgttaaca 24117
Query: 781 tattgtggtgcagtaattacctgcagagcgacttcaacctaaatctgaaacagggacgtt 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 24116 tattgtggtgcagtaattacctgcagagcgacttcaacctaaatctgaaacagggacgtt 24057
Query: 841 gctaggaatgttttttaaaaggaagcaaacccttaaacagtgtcaagtgcttgtttgttt 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 24056 gctaggaatgttttttaaaaggaagcaaacccttaaacagtgtcaagtgcttgtttgttt 23997
Query: 901 tttacttgcttgttttattttccaattgagcttgattttagttgtcgtctctgtgagatt 960
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 23996 tttacttgcttgttttattttccaattgagcttgattttagttgtcgtctctgtgagatt 23937
Query: 961 tctagggtatctgagtkgagg-tcttgactcaaa 993
|||||||||||||||| |||| ||||||||||||
Sbjct: 23936 tctagggtatctgagttgaggttcttgactcaaa 23903
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7756
Number of Sequences: 1807
Number of extensions: 7756
Number of successful extensions: 76
Number of sequences better than 1.0e-20: 1
length of query: 993
length of database: 10,358,551
effective HSP length: 16
effective length of query: 977
effective length of database: 10,329,639
effective search space: 10092057303
effective search space used: 10092057303
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)